CDS
Accession Number | TCMCG066C34082 |
gbkey | CDS |
Protein Id | XP_034576026.1 |
Location | complement(join(9575667,9576200..9576273,9576352..9576453,9576553..9576645,9576734..9576778,9576867..9576917,9577477..9577548,9578065..9578152,9579100..9579176)) |
Gene | LOC117839728 |
GeneID | 117839728 |
Organism | Setaria viridis |
Protein
Length | 200aa |
Molecule type | protein |
Topology | linear |
Data_file_division | PLN |
dblink | BioProject:PRJNA633601 |
db_source | XM_034720135.1 |
Definition | TATA-box-binding protein 2 isoform X1 [Setaria viridis] |
EGGNOG-MAPPER Annotation
COG_category | K |
Description | Transcription factor TFIID (or TATA-binding protein, TBP) |
KEGG_TC | - |
KEGG_Module | - |
KEGG_Reaction | - |
KEGG_rclass | - |
BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03000 [VIEW IN KEGG] ko03021 [VIEW IN KEGG] |
KEGG_ko |
ko:K03120
[VIEW IN KEGG] |
EC | - |
KEGG_Pathway |
ko03022
[VIEW IN KEGG] ko05016 [VIEW IN KEGG] ko05165 [VIEW IN KEGG] ko05166 [VIEW IN KEGG] ko05168 [VIEW IN KEGG] ko05169 [VIEW IN KEGG] ko05203 [VIEW IN KEGG] map03022 [VIEW IN KEGG] map05016 [VIEW IN KEGG] map05165 [VIEW IN KEGG] map05166 [VIEW IN KEGG] map05168 [VIEW IN KEGG] map05169 [VIEW IN KEGG] map05203 [VIEW IN KEGG] |
GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] |
Sequence
CDS: ATGGCGGAGCCGGGGCTCGAGGGCAGCCAGCCGGTGGATCTGTCCAAGCACCCCTCCGGCATCGTCCCCACGCTCCAGAATATCGTATCAACAGTTAATTTGGATTGCAAGCTTGACCTCAAAGCAATAGCTTTGCAAGCACGCAATGCTGAGTATAACCCAAAGCGTTTTGCTGCAGTCATCATGAGAATAAGAGAACCCAAAACCACAGCACTGATATTTGCATCGGGTAAAATGGTCTGTACTGGAGCAAAGAGCGAACAACAATCTAAGCTTGCAGCAAGAAAGTATGCTCGTATTATTCAGAAACTTGGCTTTCCAGCTAAGTTTAAGGACTTCAAGATTCAGAATATCGTTGGCTCCTGTGACGTCAAGTTTCCAATTAGGCTTGAGGGACTTGCATATTCGCACGGTGCCTTCTCAAGTTATGAACCGGAACTGTTTCCTGGCCTGATCTATCGGATGAAACAACCAAAGATCGTTCTTTTGATTTTTGTTTCTGGCAAGATTGTTTTGACTGGCGCTAAGGTGAGAGAGGAGACGTACACTGCCTTCGAAAACATCTATCCTGTGTTGACAGAGTTCAGAAAAGTCCAGCAATGA |
Protein: MAEPGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREETYTAFENIYPVLTEFRKVQQ |